BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B09LP1|AL429692
(844 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 719 0.0
3x_Contig1383 521 e-147
>3x_Contig1145
Length = 5226
Score = 719 bits (362), Expect = 0.0
Identities = 363/364 (99%)
Strand = Plus / Minus
Query: 481 ggtgatatacatcacaaaatgaatgctagtactagtaggatgatcaatgcaatgattaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5226 ggtgatatacatcacaaaatgaatgctagtactagtaggatgatcaatgcaatgattaag 5167
Query: 541 agaaagatgcagcagtcgttgacacgttctttgttgtgttcgtagacccattctagttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5166 agaaagatgcagcagtcgttgacacgttctttgttgtgttcgtagacccattctagttgt 5107
Query: 601 cgtcttcctctggaaagtttgttcatgactccgtcgacatttccgtccatttcttcgaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5106 cgtcttcctctggaaagtttgttcatgactccgtcgacatttccgtccatttcttcgaga 5047
Query: 661 atcatgccctgttctgttagttcttgacccattgtagatgcctgtagatgaatgttttgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5046 atcatgccctgttctgttagttcttgacccattgtagatgcctgtagatgaatgttttgc 4987
Query: 721 attgtctggtgaatcatgtccaattgattgtcttgttcacggagtaattgctcctgtacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4986 attgtctggtgaatcatgtccaattgattgtcttgttcacggagtaattgctcctgtacg 4927
Query: 781 gcgtcgtggtttgccgcgtctgawtggtcggtgcctgcagttgcctcgatgtccaaatcg 840
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4926 gcgtcgtggtttgccgcgtctgattggtcggtgcctgcagttgcctcgatgtccaaatcg 4867
Query: 841 aagg 844
||||
Sbjct: 4866 aagg 4863
>3x_Contig1383
Length = 6139
Score = 521 bits (262), Expect = e-147
Identities = 273/276 (98%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 1 atgaatgccagtcagtattatcaactccgtcctaatcctagtgcccttcgcctcttaaat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atgaatgccagtaagtattatcaactccgtcctaatcctagtgcccttcgcctcttaaat 220
Query: 61 gaaatcgctctcttcgatagtcttggatctgacactgtagcttgacgtgcaaaaaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gaaatcgctctcttcgatagtcttggatctgacactgtagcttgacgtgcaaaaaaccca 160
Query: 121 atccagcaagcaaccttttgcttttgtaccttaaaaactaacttggtcttaatacttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atccagcaagcaaccttttgcttttgtaccttaaaaactaacttggtcttaatacttttc 100
Query: 181 catttctcagtttccatactttctatatatttcaacaaaaaaatcagttcgaaagctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 catttctcagtttccatactttctatatatttcaacaaaaaaatcagttcgaaagctcca 40
Query: 241 ttgtggtacgatttcaaagccgctgtcgtatgtkgt 276
|||| |||||||||||||||||||||||||||| ||
Sbjct: 39 ttgt-gtacgatttcaaagccgctgtcgtatgttgt 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5859
Number of Sequences: 1807
Number of extensions: 5859
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 2
length of query: 844
length of database: 10,358,551
effective HSP length: 16
effective length of query: 828
effective length of database: 10,329,639
effective search space: 8552941092
effective search space used: 8552941092
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)